The Genotoul-Bioinfo facility is part of the Genotoul GIS. It is a team of the INRAE MIAT unit, part of the MathNum department and member of BioinfOmics (IR INRAE). It has been set up in 2000. Since 2009, it is one of the 13 IBISA bioinformatics platforms. Since 2008, the platform collaborates with the local genomic platform and processes huge volumes of data produced by second and third generation of sequencers and makes them available to biologists (ng6).
Access specific applications
Our applications
Equipment
- A computer farm : about 5000 cores, 83 Tera Byte memory (4TB on a SMP machine), Infiniband interconnection (QDR/FDR), parallel file system (GPFS)
- Web servers and virtual machines hosting infrastructure
- More than 7.5 Peta Byte disk space
Services
- Support for your projects, preferably in the form of partnerships
- Access to public biological banks
- Access to generic and specific bioinformatics software pieces
- Access to web resources
- Projects (Web/VM) hosting (ask for a project hosting)
- Training
Use this link to create your user account. All questions about technical issues can be sent using one of the Ask for forms. The platform staff can help you to process your data or to develop specific databases or software packages. For any specific request please send a mail to anim.bioinfo-occitanie-toulouse(at)inrae.fr.
How to cite us?
Collaboration
In case of collaboration with a team member, you can directly quote this person who participated to the project. In this case, both affiliations are required
<name>, Univ Toulouse, INRAE, UR 875 MIAT, Castanet-Tolosan, France
<name>, Univ Toulouse, INRAE, BioinfOmics, GenoToul Bioinformatics facility, Castanet-Tolosan, France
Acknowledgement
Research teams can thank the Toulouse Occitanie bioinformatics platform by using in their publications the following sentence
We are grateful to the genotoul bioinformatics platform Toulouse Occitanie (Bioinfo Genotoul, https://doi.org/10.15454/1.5572369328961167E12) for providing help and/or computing and/or storage resources
Our logo for communications like slides or poster
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