Cluster

Cluster (23/04/2024)

This training session is organized by the Genotoul bioinfo platform and aims at learning sequence analysis. This training session has been designed so you can deal with the platform resources and its organization. You will learn to deal with the platform compute cluster and data banks. You will launch your first processing batch on the cluster and will learn how to track and manage them. The objective of this training is to learn you how to use computing ressources from GenoToul Bioinfo cluster (submit, manage & monitor jobs). 

 

This training is focused on the practice. It consists of 3 modules with a large variety of exercises:

• Infrastructure presentation, job scheduler concept, good practices
• SLURM basics : submission, monitoring, post-analysis, ressources management
• SLURM advanced : accounting, job dependencies, jobarray

The session will take place in the room ‘salle de formation MIAT’ at the INRA center of Toulouse-Auzeville, Building C8.

Prerequisites: ability to use a Linux environment (see Linux training). 

Training slides:

Slides and TP.

To subscribe into a waiting list or if you need one of our training to be scheduled please send an email to formation-pfbioinfo(at)inrae.fr.

Bookings: Cluster