Events

First steps in AWK programming

13/10/2021 @ 9 h 00 – 17 h 00 – This “AWK programming” training session is organized by the Genotoul bioinfo platform. AWK enables to easily process columns in large text files but is also a quite powerfull programming language. This training session aims at introducing you AWK principles and details. You will learn about variables, arrays and dictionnaries. How-to create, update, delete them. You […]

How to run a nf-core nextflow workflow on genotoul ?

14/10/2021 @ 9 h 00 – 17 h 00 – This training session is organized by the Genotoul bioinfo platform and aims at learning nf-core workflow submission, error understanding and resuming jobs. We will present : the Nextflow software the nf-core community and pipelines What is a singularity image ? Where are installed the nf-core workflows ? Which version do I use ? How to […]

FROGS formation : tools for bioinformatics and statistics analyses with amplicon metagenomics data

29/11/2021 – 02/12/2021 @ 9 h 00 – 17 h 00 – The Toulouse Genopole bioinformatics platform, Sigenae and NED (GenPhySE) organize a series of training courses to familiarize yourself with the various resources it provides. These resources are currently: the hardware infrastructure, biological data banks and widely used bioinformatics softwares. This training session, organized by Bioinfo Genotoul, Sigenae and NED (GenPhySE), is designed to help you […]

Short-read alignment and small size variants calling

13/11/2023 – 14/11/2023 @ 9 h 00 – 17 h 00 – The GenoToul bioinformatics platform, Sigenae and NED (GenPhySE) organize a series of training courses to familiarize yourself with the various resources it provides. These resources are currently: the hardware infrastructure, biological data banks and widely used bioinformatics softwares. This training session, organized jointly with the Sigenae platform, is designed to introduce NGS data, in particular […]

Improve your command line skills by learning a few words of Perl

28/11/2023 @ 9 h 00 – 17 h 00 – The GenoToul bioinformatics platform and Sigenae organize a series of training courses to familiarize yourself with the various resources it provides. These resources are currently: the hardware infrastructure, biological data banks and widely used bioinformatics softwares. This “Perl one-liners” training session is organized by the Sigenae platform. Perl one-liners are small and awesome Perl programs […]

Introduction to statistics with ASTERICS

25/03/2024 – 26/03/2024 @ 9 h 00 – 17 h 00 – The Toulouse Genotoul bioinformatics platform, in collaboration with the Genotoul Biostatistics platform, and the MIAT unit, organize a 2-day training session for biologists aiming at deepening their knowledge in statistics without having to learn programming languages (like R). The class includes theoretical parts and practical applications performed using the web tool ASTERICS (freely available online) […]