Modify and extract information from large text files (13/03/2019)

This training session is organized by the Genotoul bioinfo platform and aims at understanding how to efficiently process large raw or result text files. You will learn how to add a header line or change parts of a file without having the make a copy. You will learn how to extract columns and perform simple figure manipulations on files with millions of lines. A large share of the time will be spent practicing with sed and awk.



This training is focused on practice.
Planning under construction…


The session will take place in the room ‘salle de formation’ at INRA center of Toulouse-Auzeville.

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Prerequisites: ability to use a Linux environment (see Linux training). Training materials will be available on the website before the session. Slides in a “taking notes” format will be downloadable from our web site. A Unix reference command leaflet will also be provided. Only the latter will be available during the session.



Training slides:


Bookings: Modify and extract information from large text files
Ticket Type Price Spaces
for non-academic: 550€ + 20% taxes (TVA)
for INRA's staff: 165€ duty free; for academic but non-INRA: 165€ + 20% taxes (TVA)