Publications 2019

This list includes publications for which the GenoToul Bioinformatics facility has been used (hardware infrastructure / Funding / Staff members). All Sigenae’s publications have used the GenoToul Bioinformatics hardware infrastructure.

  1. Aubin Thomas, Sylvain Barriere, Lucile Broseus, Julie Brooke, Claudio Lorenzi, Jean-Philippe Villemin, Gregory Beurier, Robert Sabatier, Christelle Reynes, Alban Mancheron & William Ritchie ; GECKO is a genetic algorithm to classify and explore high throughput sequencing data ; Communications Biology, 2; 222; doi : 10.1038/s42003-019-0456-9. see
  2. Astrid Cruaud Sabine Nidelet Pierre Arnal Audrey Weber Lucian Fusu Alex Gumovsky John Huber Andrew Polaszek Jean‐Yves Rasplus; Optimised DNA extraction and library preparation for minute arthropods: application to target enrichment in chalcid wasps used for biocontrol; Molecular Ecology Resources; doi : 10.1111/1755-0998.13006. see
  3. Aude Lalis, Stefano Mona, Emmanuelle Stoetzel, François Bonhomme, Karim Souttou, Ali Ouarour, Stéphane Aulagnier, Christiane Denys & Violaine Nicolas; Out of Africa: demographic and colonization history of the Algerian mouse (Mus spretus Lataste); Heredity volume 122, pages 150–171; doi: 10.1038/s41437-018-0089-7. see
  4. Eric Pante, Vanessa Becquet, Amélia Viricel, Pascale Garcia; Investigation of the molecular signatures of selection on ATP synthase genes in the marine bivalve Limecola balthica; Aquat. Living Resour. 32 3; doi: 10.1051/alr/2019001. see
  5. Marie Vagner, Eric Pante, Amelia Viricel, Thomas Lacoue-Labarthe, Jose-Luis Zambonino-Infante, Patrick Quazuguel, Emmanuel Dubillot, Valerie Huet, Herve Le Delliou, Christel Lefrançois, Nathalie Imbert-Auvray; Ocean warming combined with lower omega-3 nutritional availability impairs the cardio-respiratory function of a marine fish; Journal of Experimental Biology; doi: 10.1242/jeb.187179. see